The staff member currently carries out teaching activities at the University of Pavia (CdL in Biological Sciences, teaching 'Biometrics and Laboratory'). In previous years, Dr. Verderio carried out teaching activities at the School of Specialisation in Medical Genetics at the University of Milan (course in 'Statistics Applied to Medical Genetics'). The group also carries out tutoring and university/post-university training of student trainees and supervision of master's and doctoral theses in statistics or related disciplines.

 

FCI

Description

R-language algorithm for the statistical analysis of data from real-time PCR experiments for the absolute quantification of nucleic acids.

Reference

Verderio P et al. BMC Bionformatics, 2008; 9:13 (PDF)

Downloads

FCI.zip

The FCI.zip folder contains the following files:

1. User Guide FCI (Guida_utilizzo_FCI.pdf)
2. Example Dataset (example_data.csv)
3. R-language code (FCI_1_3.txt)
4. R-language command to import, implement and visualize the FCI output (FCI_run.txt)
5. Interpretation guide (Guida_interpretazione_risultati.pdf)
6. FCI Output (FCI_output.pdf)
7. Figure (FCI_figura.pdf)
8. Previous version of the algorithm (FCI_1_2.txt, FCI_1_1.txt)

NqA

Description

R-language algorithm useful for the identification of a small number of microRNAs to be used for the normalisation of data from high-throughput qPCR experiments in view of future validation studies.

Reference

Verderio P et al. Analytical Biochemistry, 2014

Downloads

NqA.zip

The NqA.zip folder contains the following files:

1. User Guide NqA (userguide_NqA.pdf)
2. Example Dataset (1.1Inputfile.dat, 1.2Inputfile.dat)
3. R-language code (NqA_code.R)
4. R-language command to import, implement and visualize the FCI output (NqA_output.pdf)
5. NqA Output (NqA_output.pdf)
6. Figure (NqA_figura.pdf)